PoPS 2.1.1 Description:
PoPS is a simple application that can be used to create, edit and experiment with PoPS specificity models, and investigate and reason about individual substrate cleavage. The PoPS project is a set of computational tools for investigating protease specificity. The main PoPS program allows users to model and profile protease specificity and predict substrate cleavage. Other tools are available to search for substrates within proteomes (protein databases for organisms), and create simple matrix models of specificity from experimental data.